nf-core / modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
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Repository to host tool-specific module files for the Nextflow DSL2 community!
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Set of commonly used Nextflow modules
A Nextflow pipeline to identify the somatic single nucleotide variants (sSNVs) by comparing a pair of tumor/normal samples.
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Nextflow training material