Extended Data Fig. 3: Large structural differences between T2T-Y and previous GRCh Y assemblies. | Nature

Extended Data Fig. 3: Large structural differences between T2T-Y and previous GRCh Y assemblies.

From: The complete sequence of a human Y chromosome

Extended Data Fig. 3

a-b. Ampliconic genes and X-degenerate sequences revealed from alignments between GRCh38-Y (Y-axis) and T2T-Y (X-axis). a. Dotplot generated using LastZ93 after softmasking with WindowMasker94. b. Identity was computed from matches and mismatches over positions with alignments, excluding gaps. c. Structural differences revealed using PRG-TK95 against GRCh38-Y and GRCh37-Y in the euchromatic region of the Y chromosome.

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