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David R Kelley
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Displaying results 1-6 of
6
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Method
:
Semisupervised adversarial neural networks for single-cell classification
Jacob C. Kimmel
and
David R. Kelley
Genome Res.
October 2021
31
:
1781
-
1793
;
Published in Advance
February 24, 2021
,
doi:
10.1101/gr.268581.120
Abstract
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Corrigendum
:
Corrigendum: Murine single-cell RNA-seq reveals cell-identity- and tissue-specific trajectories of aging
Jacob C. Kimmel
,
Lolita Penland
,
Nimrod D. Rubinstein
,
David G. Hendrickson
,
David R. Kelley
,
and
Adam Z. Rosenthal
Genome Res.
January 2020
30
:
153_1
;
doi:
10.1101/gr.259820.119
Extract
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Resource
:
Murine single-cell RNA-seq reveals cell-identity- and tissue-specific trajectories of aging
Jacob C. Kimmel
,
Lolita Penland
,
Nimrod D. Rubinstein
,
David G. Hendrickson
,
David R. Kelley
,
and
Adam Z. Rosenthal
Genome Res.
December 2019
29
:
2088
-
2103
;
Published in Advance
November 21, 2019
,
doi:
10.1101/gr.253880.119
Abstract
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Method
:
Sequential regulatory activity prediction across chromosomes with convolutional neural networks
David R. Kelley
,
Yakir A. Reshef
,
Maxwell Bileschi
,
David Belanger
,
Cory Y. McLean
,
and
Jasper Snoek
Genome Res.
May 2018
28
:
739
-
750
;
Published in Advance
March 27, 2018
,
doi:
10.1101/gr.227819.117
Abstract
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Method
:
Basset: learning the regulatory code of the accessible genome with deep convolutional neural networks
David R. Kelley
,
Jasper Snoek
,
and
John L. Rinn
Genome Res.
July 2016
26
:
990
-
999
;
Published in Advance
May 3, 2016
,
doi:
10.1101/gr.200535.115
Abstract
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Resource
:
Assemblathon 1: A competitive assessment of de novo short read assembly methods
Dent Earl
,
Keith Bradnam
,
John St. John
,
Aaron Darling
,
Dawei Lin
,
Joseph Fass
,
Hung On Ken Yu
,
Vince Buffalo
,
Daniel R. Zerbino
,
Mark Diekhans
,
Ngan Nguyen
,
Pramila Nuwantha Ariyaratne
,
Wing-Kin Sung
,
Zemin Ning
,
Matthias Haimel
,
Jared T. Simpson
,
Nuno A. Fonseca
,
İnanç Birol
,
T. Roderick Docking
,
Isaac Y. Ho
,
Daniel S. Rokhsar
,
Rayan Chikhi
,
Dominique Lavenier
,
Guillaume Chapuis
,
Delphine Naquin
,
Nicolas Maillet
,
Michael C. Schatz
,
David R. Kelley
,
Adam M. Phillippy
,
Sergey Koren
,
Shiaw-Pyng Yang
,
Wei Wu
,
Wen-Chi Chou
,
Anuj Srivastava
,
Timothy I. Shaw
,
J. Graham Ruby
,
Peter Skewes-Cox
,
Miguel Betegon
,
Michelle T. Dimon
,
Victor Solovyev
,
Igor Seledtsov
,
Petr Kosarev
,
Denis Vorobyev
,
Ricardo Ramirez-Gonzalez
,
Richard Leggett
,
Dan MacLean
,
Fangfang Xia
,
Ruibang Luo
,
Zhenyu Li
,
Yinlong Xie
,
Binghang Liu
,
Sante Gnerre
,
Iain MacCallum
,
Dariusz Przybylski
,
Filipe J. Ribeiro
,
Shuangye Yin
,
Ted Sharpe
,
Giles Hall
,
Paul J. Kersey
,
Richard Durbin
,
Shaun D. Jackman
,
Jarrod A. Chapman
,
Xiaoqiu Huang
,
Joseph L. DeRisi
,
Mario Caccamo
,
Yingrui Li
,
David B. Jaffe
,
Richard E. Green
,
David Haussler
,
Ian Korf
,
and
Benedict Paten
Genome Res.
December 2011
21
:
2224
-
2241
;
Published in Advance
September 16, 2011
,
doi:
10.1101/gr.126599.111
Abstract
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